Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBA4AP68366 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TUBA4AP68366 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TUBA4AP68366 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.58■■□□□ 1.05
TUBA4AP68366 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TUBA4AP68366 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TUBA4AP68366 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TUBA4AP68366 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.58■■□□□ 1.04
TUBA4AP68366 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TUBA4AP68366 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.58■■□□□ 1.04
TUBA4AP68366 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.58■■□□□ 1.04
TUBA4AP68366 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBA4AP68366 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBA4AP68366 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 RARRES2P2-201ENST00000394842 485 ntBASIC21.57■■□□□ 1.04
TUBA4AP68366 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.57■■□□□ 1.04
TUBA4AP68366 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TUBA4AP68366 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA4AP68366 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TUBA4AP68366 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA4AP68366 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.56■■□□□ 1.04
TUBA4AP68366 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TUBA4AP68366 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.56■■□□□ 1.04
TUBA4AP68366 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.56■■□□□ 1.04
TUBA4AP68366 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.55■■□□□ 1.04
TUBA4AP68366 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA4AP68366 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBA4AP68366 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBA4AP68366 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA4AP68366 AC127496.7-201ENST00000625110 1798 ntBASIC21.55■■□□□ 1.04
TUBA4AP68366 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TUBA4AP68366 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TUBA4AP68366 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.55■■□□□ 1.04
TUBA4AP68366 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
TUBA4AP68366 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TUBA4AP68366 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
TUBA4AP68366 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TUBA4AP68366 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TUBA4AP68366 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.54■■□□□ 1.04
TUBA4AP68366 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.54■■□□□ 1.04
TUBA4AP68366 AL359504.2-201ENST00000605506 1601 ntBASIC21.54■■□□□ 1.04
TUBA4AP68366 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 C1orf229-201ENST00000623686 2258 ntBASIC21.53■■□□□ 1.04
TUBA4AP68366 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBA4AP68366 ECEL1P2-201ENST00000461596 1295 ntBASIC21.53■■□□□ 1.04
TUBA4AP68366 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.53■■□□□ 1.04
TUBA4AP68366 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TUBA4AP68366 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA4AP68366 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA4AP68366 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA4AP68366 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBA4AP68366 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.52■■□□□ 1.04
TUBA4AP68366 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.52■■□□□ 1.04
TUBA4AP68366 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.52■■□□□ 1.04
TUBA4AP68366 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA4AP68366 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TUBA4AP68366 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TUBA4AP68366 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TUBA4AP68366 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBA4AP68366 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.51■■□□□ 1.03
TUBA4AP68366 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA4AP68366 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
TUBA4AP68366 LINC00526-201ENST00000581067 1875 ntBASIC21.51■■□□□ 1.03
TUBA4AP68366 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TUBA4AP68366 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA4AP68366 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA4AP68366 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA4AP68366 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA4AP68366 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TUBA4AP68366 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA4AP68366 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
TUBA4AP68366 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA4AP68366 SMPD5-203ENST00000639008 1464 ntBASIC21.49■■□□□ 1.03
TUBA4AP68366 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TUBA4AP68366 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TUBA4AP68366 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.48■■□□□ 1.03
TUBA4AP68366 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA4AP68366 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA4AP68366 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA4AP68366 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA4AP68366 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TUBA4AP68366 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TUBA4AP68366 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TUBA4AP68366 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.47■■□□□ 1.03
TUBA4AP68366 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TUBA4AP68366 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TUBA4AP68366 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TUBA4AP68366 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TUBA4AP68366 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms