Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.48■□□□□ 0.71
EFNA4P52798 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EFNA4P52798 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EFNA4P52798 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EFNA4P52798 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EFNA4P52798 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.47■□□□□ 0.71
EFNA4P52798 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.47■□□□□ 0.71
EFNA4P52798 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.47■□□□□ 0.71
EFNA4P52798 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
EFNA4P52798 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.47■□□□□ 0.71
EFNA4P52798 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.47■□□□□ 0.71
EFNA4P52798 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA4P52798 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA4P52798 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EFNA4P52798 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA4P52798 UNC93B3-201ENST00000308076 687 ntBASIC19.46■□□□□ 0.71
EFNA4P52798 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.46■□□□□ 0.71
EFNA4P52798 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.46■□□□□ 0.71
EFNA4P52798 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
EFNA4P52798 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EFNA4P52798 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.45■□□□□ 0.7
EFNA4P52798 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EFNA4P52798 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
EFNA4P52798 MIR6089-201ENST00000616698 64 ntBASIC19.45■□□□□ 0.7
EFNA4P52798 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA4P52798 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.45■□□□□ 0.7
EFNA4P52798 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EFNA4P52798 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 AL136162.1-201ENST00000607711 1078 ntBASIC19.44■□□□□ 0.7
EFNA4P52798 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.44■□□□□ 0.7
EFNA4P52798 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EFNA4P52798 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA4P52798 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNA4P52798 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA4P52798 AC131274.2-201ENST00000580697 1507 ntBASIC19.43■□□□□ 0.7
EFNA4P52798 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.43■□□□□ 0.7
EFNA4P52798 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA4P52798 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNA4P52798 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.43■□□□□ 0.7
EFNA4P52798 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNA4P52798 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.42■□□□□ 0.7
EFNA4P52798 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.42■□□□□ 0.7
EFNA4P52798 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.42■□□□□ 0.7
EFNA4P52798 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
EFNA4P52798 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EFNA4P52798 AC135279.3-201ENST00000610945 1311 ntBASIC19.42■□□□□ 0.7
EFNA4P52798 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA4P52798 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.42■□□□□ 0.7
EFNA4P52798 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA4P52798 AC145676.1-201ENST00000514988 2004 ntBASIC19.41■□□□□ 0.7
EFNA4P52798 AL022069.1-201ENST00000568025 1636 ntBASIC19.41■□□□□ 0.7
EFNA4P52798 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA4P52798 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA4P52798 DUX4L19-201ENST00000557448 1267 ntBASIC19.41■□□□□ 0.7
EFNA4P52798 AC142381.2-201ENST00000566120 298 ntBASIC19.41■□□□□ 0.7
EFNA4P52798 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.41■□□□□ 0.7
EFNA4P52798 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA4P52798 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.4■□□□□ 0.7
EFNA4P52798 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.4■□□□□ 0.7
EFNA4P52798 AC092171.4-201ENST00000609130 632 ntBASIC19.4■□□□□ 0.7
EFNA4P52798 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EFNA4P52798 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA4P52798 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA4P52798 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
EFNA4P52798 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA4P52798 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNA4P52798 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
EFNA4P52798 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA4P52798 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.39■□□□□ 0.69
EFNA4P52798 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.39■□□□□ 0.69
EFNA4P52798 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA4P52798 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNA4P52798 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA4P52798 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA4P52798 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNA4P52798 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms