Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.87■□□□□ 0.61
SNCAP37840 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.87■□□□□ 0.61
SNCAP37840 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.87■□□□□ 0.61
SNCAP37840 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNCAP37840 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.86■□□□□ 0.61
SNCAP37840 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNCAP37840 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 SMPD5-203ENST00000639008 1464 ntBASIC18.86■□□□□ 0.61
SNCAP37840 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.86■□□□□ 0.61
SNCAP37840 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.86■□□□□ 0.61
SNCAP37840 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.86■□□□□ 0.61
SNCAP37840 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNCAP37840 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.85■□□□□ 0.61
SNCAP37840 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.85■□□□□ 0.61
SNCAP37840 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNCAP37840 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.85■□□□□ 0.61
SNCAP37840 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNCAP37840 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNCAP37840 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNCAP37840 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.84■□□□□ 0.61
SNCAP37840 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 AC025884.2-201ENST00000553429 711 ntBASIC18.84■□□□□ 0.61
SNCAP37840 AC060814.1-201ENST00000554326 538 ntBASIC18.84■□□□□ 0.61
SNCAP37840 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.84■□□□□ 0.61
SNCAP37840 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SNCAP37840 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SNCAP37840 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNCAP37840 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.84■□□□□ 0.61
SNCAP37840 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SNCAP37840 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
SNCAP37840 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNCAP37840 EP400NL-214ENST00000641289 2402 ntBASIC18.83■□□□□ 0.61
SNCAP37840 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNCAP37840 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNCAP37840 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNCAP37840 AL157400.5-201ENST00000507624 621 ntBASIC18.83■□□□□ 0.6
SNCAP37840 MIR7108-201ENST00000614319 87 ntBASIC18.83■□□□□ 0.6
SNCAP37840 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.83■□□□□ 0.6
SNCAP37840 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.83■□□□□ 0.6
SNCAP37840 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNCAP37840 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNCAP37840 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 ABCB10P4-201ENST00000566803 2184 ntBASIC18.82■□□□□ 0.6
SNCAP37840 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.82■□□□□ 0.6
SNCAP37840 PKD1P6-201ENST00000343738 4769 ntBASIC18.82■□□□□ 0.6
SNCAP37840 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNCAP37840 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.82■□□□□ 0.6
SNCAP37840 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
SNCAP37840 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNCAP37840 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNCAP37840 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNCAP37840 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNCAP37840 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNCAP37840 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNCAP37840 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNCAP37840 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms