Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 AC011551.1-201ENST00000614101 683 ntBASIC20.12■□□□□ 0.81
LCATP04180 PVT1_1.1-201ENST00000615125 194 ntBASIC20.12■□□□□ 0.81
LCATP04180 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LCATP04180 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCATP04180 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCATP04180 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCATP04180 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LCATP04180 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LCATP04180 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LCATP04180 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.1■□□□□ 0.81
LCATP04180 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.1■□□□□ 0.81
LCATP04180 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.1■□□□□ 0.81
LCATP04180 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.1■□□□□ 0.81
LCATP04180 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCATP04180 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LCATP04180 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LCATP04180 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 AC004812.2-201ENST00000611079 2094 ntBASIC20.09■□□□□ 0.81
LCATP04180 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.09■□□□□ 0.81
LCATP04180 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.09■□□□□ 0.81
LCATP04180 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.09■□□□□ 0.81
LCATP04180 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.09■□□□□ 0.81
LCATP04180 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCATP04180 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LCATP04180 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LCATP04180 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LCATP04180 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.08■□□□□ 0.81
LCATP04180 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
LCATP04180 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LCATP04180 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.08■□□□□ 0.81
LCATP04180 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.08■□□□□ 0.81
LCATP04180 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LCATP04180 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.08■□□□□ 0.8
LCATP04180 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LCATP04180 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
LCATP04180 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.07■□□□□ 0.8
LCATP04180 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCATP04180 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
LCATP04180 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.07■□□□□ 0.8
LCATP04180 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.07■□□□□ 0.8
LCATP04180 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.07■□□□□ 0.8
LCATP04180 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.07■□□□□ 0.8
LCATP04180 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LCATP04180 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LCATP04180 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.06■□□□□ 0.8
LCATP04180 AC120024.1-201ENST00000562672 995 ntBASIC20.06■□□□□ 0.8
LCATP04180 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.06■□□□□ 0.8
LCATP04180 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCATP04180 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
LCATP04180 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.05■□□□□ 0.8
LCATP04180 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
LCATP04180 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCATP04180 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LCATP04180 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LCATP04180 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LCATP04180 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LCATP04180 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 THA1P-201ENST00000590384 1145 ntBASIC20.04■□□□□ 0.8
LCATP04180 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 ABCB10P4-201ENST00000566803 2184 ntBASIC20.04■□□□□ 0.8
LCATP04180 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCATP04180 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LCATP04180 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCATP04180 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCATP04180 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCATP04180 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms