Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE3O75131 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE3O75131 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE3O75131 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPNE3O75131 SNX5-217ENST00000606557 1087 ntBASIC22.08■■□□□ 1.13
CPNE3O75131 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.08■■□□□ 1.13
CPNE3O75131 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CPNE3O75131 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
CPNE3O75131 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE3O75131 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE3O75131 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE3O75131 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE3O75131 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.07■■□□□ 1.12
CPNE3O75131 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CPNE3O75131 AC145676.1-201ENST00000514988 2004 ntBASIC22.07■■□□□ 1.12
CPNE3O75131 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE3O75131 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE3O75131 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 AL136116.3-201ENST00000402907 1138 ntBASIC22.06■■□□□ 1.12
CPNE3O75131 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.06■■□□□ 1.12
CPNE3O75131 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CPNE3O75131 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CPNE3O75131 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE3O75131 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
CPNE3O75131 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.05■■□□□ 1.12
CPNE3O75131 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CPNE3O75131 MIR6722-201ENST00000617286 78 ntBASIC22.05■■□□□ 1.12
CPNE3O75131 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.05■■□□□ 1.12
CPNE3O75131 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPNE3O75131 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.05■■□□□ 1.12
CPNE3O75131 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE3O75131 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE3O75131 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.04■■□□□ 1.12
CPNE3O75131 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE3O75131 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CPNE3O75131 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
CPNE3O75131 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE3O75131 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE3O75131 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.03■■□□□ 1.12
CPNE3O75131 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE3O75131 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE3O75131 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.03■■□□□ 1.12
CPNE3O75131 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE3O75131 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE3O75131 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CPNE3O75131 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.02■■□□□ 1.12
CPNE3O75131 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE3O75131 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE3O75131 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.02■■□□□ 1.12
CPNE3O75131 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.02■■□□□ 1.12
CPNE3O75131 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CPNE3O75131 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE3O75131 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE3O75131 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CPNE3O75131 DUSP8P4-201ENST00000399538 1761 ntBASIC22.02■■□□□ 1.11
CPNE3O75131 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.01■■□□□ 1.11
CPNE3O75131 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.01■■□□□ 1.11
CPNE3O75131 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CPNE3O75131 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CPNE3O75131 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CPNE3O75131 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE3O75131 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.01■■□□□ 1.11
CPNE3O75131 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
CPNE3O75131 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CPNE3O75131 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22■■□□□ 1.11
CPNE3O75131 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22■■□□□ 1.11
CPNE3O75131 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE3O75131 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CPNE3O75131 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE3O75131 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE3O75131 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE3O75131 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CPNE3O75131 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE3O75131 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE3O75131 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.98■■□□□ 1.11
CPNE3O75131 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE3O75131 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CPNE3O75131 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms