Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
FOXN1O15353 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
FOXN1O15353 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
FOXN1O15353 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
FOXN1O15353 KRT18P5-201ENST00000436075 1291 ntBASIC27.7■■■□□ 2.02
FOXN1O15353 AC004448.1-201ENST00000458332 883 ntBASIC27.7■■■□□ 2.02
FOXN1O15353 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.7■■■□□ 2.02
FOXN1O15353 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.7■■■□□ 2.02
FOXN1O15353 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
FOXN1O15353 RASA4CP-201ENST00000424092 1398 ntBASIC27.7■■■□□ 2.02
FOXN1O15353 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
FOXN1O15353 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
FOXN1O15353 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
FOXN1O15353 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.7■■■□□ 2.02
FOXN1O15353 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
FOXN1O15353 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
FOXN1O15353 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.69■■■□□ 2.02
FOXN1O15353 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.69■■■□□ 2.02
FOXN1O15353 HLA-L-209ENST00000420110 1011 ntBASIC27.69■■■□□ 2.02
FOXN1O15353 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.68■■■□□ 2.02
FOXN1O15353 AC145676.1-201ENST00000514988 2004 ntBASIC27.68■■■□□ 2.02
FOXN1O15353 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
FOXN1O15353 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
FOXN1O15353 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.68■■■□□ 2.02
FOXN1O15353 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.68■■■□□ 2.02
FOXN1O15353 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.68■■■□□ 2.02
FOXN1O15353 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
FOXN1O15353 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.68■■■□□ 2.02
FOXN1O15353 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
FOXN1O15353 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
FOXN1O15353 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC27.67■■■□□ 2.02
FOXN1O15353 ABHD17AP1-201ENST00000358206 933 ntBASIC27.67■■■□□ 2.02
FOXN1O15353 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
FOXN1O15353 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.67■■■□□ 2.02
FOXN1O15353 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
FOXN1O15353 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.67■■■□□ 2.02
FOXN1O15353 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
FOXN1O15353 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
FOXN1O15353 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.67■■■□□ 2.02
FOXN1O15353 AC092803.2-201ENST00000564287 1899 ntBASIC27.66■■■□□ 2.02
FOXN1O15353 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.66■■■□□ 2.02
FOXN1O15353 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
FOXN1O15353 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
FOXN1O15353 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.66■■■□□ 2.02
FOXN1O15353 SP2-202ENST00000613139 908 ntTSL 5 BASIC27.66■■■□□ 2.02
FOXN1O15353 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.66■■■□□ 2.02
FOXN1O15353 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
FOXN1O15353 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
FOXN1O15353 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.65■■■□□ 2.02
FOXN1O15353 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
FOXN1O15353 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.64■■■□□ 2.02
FOXN1O15353 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
FOXN1O15353 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
FOXN1O15353 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
FOXN1O15353 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.63■■■□□ 2.01
FOXN1O15353 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
FOXN1O15353 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.63■■■□□ 2.01
FOXN1O15353 MIR4767-201ENST00000582827 78 ntBASIC27.63■■■□□ 2.01
FOXN1O15353 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.63■■■□□ 2.01
FOXN1O15353 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXN1O15353 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXN1O15353 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.62■■■□□ 2.01
FOXN1O15353 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXN1O15353 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
FOXN1O15353 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.62■■■□□ 2.01
FOXN1O15353 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXN1O15353 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.61■■■□□ 2.01
FOXN1O15353 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
FOXN1O15353 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
FOXN1O15353 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.6■■■□□ 2.01
FOXN1O15353 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.6■■■□□ 2.01
FOXN1O15353 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXN1O15353 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
FOXN1O15353 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
FOXN1O15353 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
FOXN1O15353 AC135731.1-201ENST00000569415 2548 ntBASIC27.59■■■□□ 2.01
FOXN1O15353 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
FOXN1O15353 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
FOXN1O15353 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.59■■■□□ 2.01
FOXN1O15353 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
FOXN1O15353 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.59■■■□□ 2.01
FOXN1O15353 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.59■■■□□ 2.01
FOXN1O15353 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
FOXN1O15353 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
FOXN1O15353 DUSP8P4-201ENST00000399538 1761 ntBASIC27.58■■■□□ 2.01
FOXN1O15353 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.58■■■□□ 2.01
FOXN1O15353 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
FOXN1O15353 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.58■■■□□ 2.01
FOXN1O15353 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
FOXN1O15353 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms