Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.52■□□□□ 0.23
TRGV4A0A0C4DH28 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.52■□□□□ 0.23
TRGV4A0A0C4DH28 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
TRGV4A0A0C4DH28 AC093323.1-202ENST00000635031 2045 ntBASIC16.52■□□□□ 0.23
TRGV4A0A0C4DH28 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRGV4A0A0C4DH28 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.51■□□□□ 0.23
TRGV4A0A0C4DH28 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.51■□□□□ 0.23
TRGV4A0A0C4DH28 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV4A0A0C4DH28 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.51■□□□□ 0.23
TRGV4A0A0C4DH28 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 AC090877.2-201ENST00000558441 1738 ntBASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 AC022616.5-201ENST00000518796 181 ntBASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV4A0A0C4DH28 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 AC019171.1-201ENST00000601251 1056 ntBASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 AC141586.4-201ENST00000624558 1573 ntBASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV4A0A0C4DH28 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 AL033527.3-201ENST00000566366 1196 ntBASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 HLA-L-211ENST00000482052 1765 ntBASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV4A0A0C4DH28 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 LINC00543-201ENST00000567234 1845 ntBASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRGV4A0A0C4DH28 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 AC010980.1-201ENST00000587192 1142 ntBASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRGV4A0A0C4DH28 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRGV4A0A0C4DH28 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRGV4A0A0C4DH28 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.45■□□□□ 0.22
TRGV4A0A0C4DH28 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 AC011551.1-201ENST00000614101 683 ntBASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms