Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 AC022616.5-201ENST00000518796 181 ntBASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 AC011551.1-201ENST00000614101 683 ntBASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 AC120024.1-201ENST00000562672 995 ntBASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AC103834.1-201ENST00000520383 144 ntBASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.45■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 KRT8P33-201ENST00000508125 1423 ntBASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 MIR4508-201ENST00000584178 70 ntBASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.4■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
IGKV1D-43A0A0B4J1Z2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 KRT18P24-201ENST00000344739 1156 ntBASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-43A0A0B4J1Z2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms