Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV16A0A0A6YYK6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16■□□□□ 0.15
TRAV16A0A0A6YYK6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV16A0A0A6YYK6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV16A0A0A6YYK6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 ECEL1P2-201ENST00000461596 1295 ntBASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV16A0A0A6YYK6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV16A0A0A6YYK6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV16A0A0A6YYK6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV16A0A0A6YYK6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV16A0A0A6YYK6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV16A0A0A6YYK6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRAV16A0A0A6YYK6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV16A0A0A6YYK6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 AL359504.2-201ENST00000605506 1601 ntBASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 MIR3960-201ENST00000583311 91 ntBASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 AC092296.2-201ENST00000589470 999 ntBASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 SMPD5-203ENST00000639008 1464 ntBASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV16A0A0A6YYK6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV16A0A0A6YYK6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms