Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 EEF1DP4-201ENST00000446006 880 ntBASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 AC005829.1-201ENST00000570002 483 ntBASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 AC097359.2-201ENST00000604992 2389 ntBASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGB4Q9UN71 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 ELL2P1-201ENST00000413990 1906 ntBASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 DNAJB3-201ENST00000446806 729 ntBASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 PGAM5P1-201ENST00000518923 814 ntBASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGB4Q9UN71 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 335.4 ms