Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 PRSS30P-206ENST00000641773 873 ntBASIC15.32■□□□□ 0.04
MRM3Q9HC36 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRM3Q9HC36 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.32■□□□□ 0.04
MRM3Q9HC36 LINC00552-201ENST00000625151 2579 ntBASIC15.31■□□□□ 0.04
MRM3Q9HC36 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 AL136379.1-201ENST00000623471 2642 ntBASIC15.31■□□□□ 0.04
MRM3Q9HC36 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 AC063926.3-201ENST00000624734 5658 ntBASIC15.31■□□□□ 0.04
MRM3Q9HC36 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TSPY16P-201ENST00000449843 468 ntBASIC15.31■□□□□ 0.04
MRM3Q9HC36 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.31■□□□□ 0.04
MRM3Q9HC36 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.31■□□□□ 0.04
MRM3Q9HC36 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MRM3Q9HC36 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 SLC7A15P-201ENST00000424028 1363 ntBASIC15.3■□□□□ 0.04
MRM3Q9HC36 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 AC009118.2-201ENST00000613275 655 ntBASIC15.3■□□□□ 0.04
MRM3Q9HC36 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 AL157414.3-201ENST00000624276 1954 ntBASIC15.3■□□□□ 0.04
MRM3Q9HC36 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
MRM3Q9HC36 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 AC023908.3-201ENST00000564211 3047 ntBASIC15.3■□□□□ 0.04
MRM3Q9HC36 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MRM3Q9HC36 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.29■□□□□ 0.04
MRM3Q9HC36 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MRM3Q9HC36 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.29■□□□□ 0.04
MRM3Q9HC36 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MRM3Q9HC36 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms