Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 AL138725.1-201ENST00000407347 1314 ntBASIC17.63■□□□□ 0.41
CDCA5Q96FF9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDCA5Q96FF9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AC006449.5-201ENST00000610658 2098 ntBASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AL583805.1-201ENST00000391389 531 ntBASIC17.62■□□□□ 0.41
CDCA5Q96FF9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AP000358.1-201ENST00000456260 156 ntBASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AC018463.1-201ENST00000456674 917 ntBASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 RPL18AP3-201ENST00000462885 528 ntBASIC17.62■□□□□ 0.41
CDCA5Q96FF9 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA5Q96FF9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AP003680.1-201ENST00000598970 3660 ntBASIC17.61■□□□□ 0.41
CDCA5Q96FF9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 NDUFS6P1-201ENST00000485187 316 ntBASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 PHBP15-201ENST00000574228 665 ntBASIC17.61■□□□□ 0.41
CDCA5Q96FF9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AL132780.4-201ENST00000624870 1135 ntBASIC17.61■□□□□ 0.41
CDCA5Q96FF9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 AC112504.1-201ENST00000623415 1841 ntBASIC17.61■□□□□ 0.41
CDCA5Q96FF9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA5Q96FF9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms