Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.35■□□□□ 0.37
DHX58Q96C10 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.35■□□□□ 0.37
DHX58Q96C10 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.35■□□□□ 0.37
DHX58Q96C10 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.35■□□□□ 0.37
DHX58Q96C10 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.35■□□□□ 0.37
DHX58Q96C10 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.35■□□□□ 0.37
DHX58Q96C10 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 AC000095.1-201ENST00000603208 874 ntBASIC17.35■□□□□ 0.37
DHX58Q96C10 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
DHX58Q96C10 AC004840.1-201ENST00000636359 365 ntBASIC17.35■□□□□ 0.37
DHX58Q96C10 LINC00552-201ENST00000625151 2579 ntBASIC17.35■□□□□ 0.37
DHX58Q96C10 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.35■□□□□ 0.37
DHX58Q96C10 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
DHX58Q96C10 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.35■□□□□ 0.37
DHX58Q96C10 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
DHX58Q96C10 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.35■□□□□ 0.37
DHX58Q96C10 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DHX58Q96C10 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
DHX58Q96C10 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.34■□□□□ 0.37
DHX58Q96C10 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.34■□□□□ 0.37
DHX58Q96C10 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.34■□□□□ 0.37
DHX58Q96C10 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 AC004890.2-204ENST00000481968 304 ntBASIC17.34■□□□□ 0.37
DHX58Q96C10 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 AC135586.1-201ENST00000539323 574 ntBASIC17.34■□□□□ 0.37
DHX58Q96C10 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.34■□□□□ 0.37
DHX58Q96C10 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 AL390955.2-201ENST00000603032 514 ntBASIC17.34■□□□□ 0.37
DHX58Q96C10 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.34■□□□□ 0.37
DHX58Q96C10 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 CICP14-201ENST00000629111 2732 ntBASIC17.34■□□□□ 0.37
DHX58Q96C10 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
DHX58Q96C10 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DHX58Q96C10 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.33■□□□□ 0.37
DHX58Q96C10 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DHX58Q96C10 AC139749.1-202ENST00000617529 3139 ntBASIC17.33■□□□□ 0.37
DHX58Q96C10 AC012508.2-201ENST00000567613 1472 ntBASIC17.33■□□□□ 0.37
DHX58Q96C10 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
DHX58Q96C10 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 MEIS3P1-201ENST00000495167 958 ntBASIC17.33■□□□□ 0.36
DHX58Q96C10 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.33■□□□□ 0.36
DHX58Q96C10 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.33■□□□□ 0.36
DHX58Q96C10 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.33■□□□□ 0.36
DHX58Q96C10 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DHX58Q96C10 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.33■□□□□ 0.36
DHX58Q96C10 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms