Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 RPSAP52-203ENST00000622976 1023 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CU634019.7-201ENST00000624153 1185 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 FP236241.2-201ENST00000624906 1185 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AL033527.4-201ENST00000641026 673 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 REXO1L6P-201ENST00000603433 1515 ntBASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC33Q8N5R6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC018665.1-201ENST00000622927 1362 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 FAM45BP-202ENST00000592932 1624 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 RPL13P2-201ENST00000440687 659 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC104989.1-201ENST00000519711 778 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC133539.2-201ENST00000604757 467 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC33Q8N5R6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC33Q8N5R6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms