Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AL139384.1-201ENST00000612143 3047 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AC022616.1-201ENST00000518688 554 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AP003171.2-201ENST00000528208 925 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 FGFR3P5-201ENST00000564496 886 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 RN7SL774P-201ENST00000577467 290 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 TUBBP5-203ENST00000508529 1334 ntBASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEFF1Q8IYR6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TMEFF1Q8IYR6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.13■□□□□ 0.01
TMEFF1Q8IYR6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms