Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ODF4Q2M2E3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ODF4Q2M2E3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ODF4Q2M2E3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.67□□□□□ -0.22
ODF4Q2M2E3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AC026396.1-201ENST00000419388 421 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 FAM58DP-201ENST00000428076 619 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 MTND6P24-201ENST00000440466 518 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AC022145.2-201ENST00000598203 171 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 MTDHP5-201ENST00000598980 586 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 AC055717.3-201ENST00000622967 595 ntBASIC13.66□□□□□ -0.22
ODF4Q2M2E3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ODF4Q2M2E3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 PGAM5P1-201ENST00000518923 814 ntBASIC13.65□□□□□ -0.22
ODF4Q2M2E3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 BANF1P1-201ENST00000553684 263 ntBASIC13.65□□□□□ -0.22
ODF4Q2M2E3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC018529.1-201ENST00000613063 361 ntBASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 CICP4-201ENST00000447359 2812 ntBASIC13.65□□□□□ -0.22
ODF4Q2M2E3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms