Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.23□□□□□ -0.29
AP3S2P59780 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.23□□□□□ -0.29
AP3S2P59780 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP3S2P59780 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.23□□□□□ -0.29
AP3S2P59780 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.22□□□□□ -0.29
AP3S2P59780 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.22□□□□□ -0.29
AP3S2P59780 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.22□□□□□ -0.29
AP3S2P59780 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
AP3S2P59780 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 RPS8P6-201ENST00000426177 609 ntBASIC13.22□□□□□ -0.29
AP3S2P59780 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.22□□□□□ -0.29
AP3S2P59780 FGFR3P6-201ENST00000457012 610 ntBASIC13.22□□□□□ -0.29
AP3S2P59780 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
AP3S2P59780 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.22□□□□□ -0.29
AP3S2P59780 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.22□□□□□ -0.29
AP3S2P59780 AC116407.4-201ENST00000623319 1061 ntBASIC13.22□□□□□ -0.29
AP3S2P59780 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.22□□□□□ -0.29
AP3S2P59780 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
AP3S2P59780 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
AP3S2P59780 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
AP3S2P59780 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
AP3S2P59780 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP3S2P59780 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AP3S2P59780 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AP3S2P59780 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.21□□□□□ -0.29
AP3S2P59780 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
AP3S2P59780 AC073621.1-201ENST00000392730 636 ntBASIC13.21□□□□□ -0.29
AP3S2P59780 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AP3S2P59780 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
AP3S2P59780 AC098859.1-201ENST00000502915 1238 ntBASIC13.21□□□□□ -0.29
AP3S2P59780 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.21□□□□□ -0.29
AP3S2P59780 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.21□□□□□ -0.29
AP3S2P59780 MIR3180-1-201ENST00000580374 94 ntBASIC13.21□□□□□ -0.29
AP3S2P59780 MIR3180-3-201ENST00000584616 94 ntBASIC13.21□□□□□ -0.29
AP3S2P59780 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.21□□□□□ -0.29
AP3S2P59780 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.21□□□□□ -0.29
AP3S2P59780 AC008608.2-201ENST00000606089 416 ntBASIC13.21□□□□□ -0.29
AP3S2P59780 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms