Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.66□□□□□ -0.06
NR1H2P55055 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
NR1H2P55055 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR1H2P55055 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.65□□□□□ -0.06
NR1H2P55055 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 MIR770-201ENST00000390219 98 ntBASIC14.65□□□□□ -0.06
NR1H2P55055 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H2P55055 HCG4-201ENST00000418983 998 ntBASIC14.65□□□□□ -0.06
NR1H2P55055 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H2P55055 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.65□□□□□ -0.06
NR1H2P55055 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.65□□□□□ -0.06
NR1H2P55055 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
NR1H2P55055 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
NR1H2P55055 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
NR1H2P55055 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.65□□□□□ -0.06
NR1H2P55055 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 AC012569.1-201ENST00000591191 1524 ntBASIC14.65□□□□□ -0.06
NR1H2P55055 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 AKAP8P1-201ENST00000434743 1349 ntBASIC14.65□□□□□ -0.06
NR1H2P55055 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.65□□□□□ -0.06
NR1H2P55055 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR1H2P55055 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.65□□□□□ -0.06
NR1H2P55055 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NR1H2P55055 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NR1H2P55055 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
NR1H2P55055 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
NR1H2P55055 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.64□□□□□ -0.07
NR1H2P55055 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
NR1H2P55055 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.64□□□□□ -0.07
NR1H2P55055 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H2P55055 ADH5P3-201ENST00000433842 1137 ntBASIC14.64□□□□□ -0.07
NR1H2P55055 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.64□□□□□ -0.07
NR1H2P55055 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.64□□□□□ -0.07
NR1H2P55055 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 HLA-J-203ENST00000494367 1087 ntBASIC14.64□□□□□ -0.07
NR1H2P55055 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.64□□□□□ -0.07
NR1H2P55055 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.64□□□□□ -0.07
NR1H2P55055 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.64□□□□□ -0.07
NR1H2P55055 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H2P55055 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms