Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.27■□□□□ 0.35
USP11P51784 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP11P51784 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP11P51784 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP11P51784 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP11P51784 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 AC091951.1-201ENST00000512854 2465 ntBASIC17.26■□□□□ 0.35
USP11P51784 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP11P51784 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
USP11P51784 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.26■□□□□ 0.35
USP11P51784 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
USP11P51784 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.26■□□□□ 0.35
USP11P51784 AC007551.1-201ENST00000457394 519 ntBASIC17.26■□□□□ 0.35
USP11P51784 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
USP11P51784 FTH1P14-201ENST00000482930 551 ntBASIC17.26■□□□□ 0.35
USP11P51784 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.26■□□□□ 0.35
USP11P51784 RN7SL48P-201ENST00000579283 293 ntBASIC17.26■□□□□ 0.35
USP11P51784 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 AL512343.1-201ENST00000605837 169 ntBASIC17.26■□□□□ 0.35
USP11P51784 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP11P51784 AL137783.1-201ENST00000623494 1896 ntBASIC17.26■□□□□ 0.35
USP11P51784 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.26■□□□□ 0.35
USP11P51784 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP11P51784 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
USP11P51784 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.25■□□□□ 0.35
USP11P51784 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.25■□□□□ 0.35
USP11P51784 C2orf27AP3-201ENST00000434123 579 ntBASIC17.25■□□□□ 0.35
USP11P51784 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
USP11P51784 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 GPR53P-205ENST00000457298 1084 ntBASIC17.25■□□□□ 0.35
USP11P51784 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.25■□□□□ 0.35
USP11P51784 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP11P51784 AL354718.3-201ENST00000616414 581 ntBASIC17.25■□□□□ 0.35
USP11P51784 CR382287.1-201ENST00000623954 586 ntBASIC17.25■□□□□ 0.35
USP11P51784 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 AGAP7P-201ENST00000582299 2062 ntBASIC17.25■□□□□ 0.35
USP11P51784 AGAP14-201ENST00000624701 2060 ntBASIC17.25■□□□□ 0.35
USP11P51784 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
USP11P51784 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
USP11P51784 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP11P51784 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.24■□□□□ 0.35
USP11P51784 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
USP11P51784 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.24■□□□□ 0.35
USP11P51784 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP11P51784 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP11P51784 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms