Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.62■□□□□ 0.25
PDE6CP51160 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 GK-202ENST00000378941 458 ntTSL 3 BASIC16.62■□□□□ 0.25
PDE6CP51160 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
PDE6CP51160 TOMM22P5-201ENST00000416399 439 ntBASIC16.62■□□□□ 0.25
PDE6CP51160 RN7SL752P-201ENST00000463779 287 ntBASIC16.62■□□□□ 0.25
PDE6CP51160 AC104596.2-201ENST00000512793 793 ntBASIC16.62■□□□□ 0.25
PDE6CP51160 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 RARRES2P5-201ENST00000564013 466 ntBASIC16.62■□□□□ 0.25
PDE6CP51160 AC008494.3-201ENST00000606615 944 ntBASIC16.62■□□□□ 0.25
PDE6CP51160 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PDE6CP51160 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PDE6CP51160 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.62■□□□□ 0.25
PDE6CP51160 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.62■□□□□ 0.25
PDE6CP51160 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDE6CP51160 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDE6CP51160 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PDE6CP51160 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDE6CP51160 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 AC023310.3-201ENST00000557027 670 ntBASIC16.61■□□□□ 0.25
PDE6CP51160 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.61■□□□□ 0.25
PDE6CP51160 AC100756.1-201ENST00000562736 682 ntBASIC16.61■□□□□ 0.25
PDE6CP51160 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDE6CP51160 AC138749.3-201ENST00000567691 622 ntBASIC16.61■□□□□ 0.25
PDE6CP51160 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.61■□□□□ 0.25
PDE6CP51160 AC116165.1-201ENST00000611806 668 ntBASIC16.61■□□□□ 0.25
PDE6CP51160 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.61■□□□□ 0.25
PDE6CP51160 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDE6CP51160 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
PDE6CP51160 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDE6CP51160 MYO15B-237ENST00000642007 4893 ntBASIC16.61■□□□□ 0.25
PDE6CP51160 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 MROH4P-201ENST00000431302 1578 ntBASIC16.6■□□□□ 0.25
PDE6CP51160 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.6■□□□□ 0.25
PDE6CP51160 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.6■□□□□ 0.25
PDE6CP51160 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDE6CP51160 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.6■□□□□ 0.25
PDE6CP51160 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms