Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LHX2P50458 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 HYMAI-201ENST00000635591 3347 ntBASIC13.64□□□□□ -0.23
LHX2P50458 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
LHX2P50458 MROH4P-201ENST00000431302 1578 ntBASIC13.64□□□□□ -0.23
LHX2P50458 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.64□□□□□ -0.23
LHX2P50458 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
LHX2P50458 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.64□□□□□ -0.23
LHX2P50458 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.64□□□□□ -0.23
LHX2P50458 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.64□□□□□ -0.23
LHX2P50458 RNA5SP412-201ENST00000516234 123 ntBASIC13.64□□□□□ -0.23
LHX2P50458 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LHX2P50458 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.64□□□□□ -0.23
LHX2P50458 AL583810.1-201ENST00000553344 1045 ntBASIC13.64□□□□□ -0.23
LHX2P50458 AC023310.1-201ENST00000554836 735 ntBASIC13.64□□□□□ -0.23
LHX2P50458 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.64□□□□□ -0.23
LHX2P50458 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.64□□□□□ -0.23
LHX2P50458 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.64□□□□□ -0.23
LHX2P50458 AL033527.4-201ENST00000641026 673 ntBASIC13.64□□□□□ -0.23
LHX2P50458 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.64□□□□□ -0.23
LHX2P50458 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LHX2P50458 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LHX2P50458 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LHX2P50458 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.64□□□□□ -0.23
LHX2P50458 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 PPT1-215ENST00000641471 2368 ntBASIC13.64□□□□□ -0.23
LHX2P50458 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LHX2P50458 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 AP000845.1-201ENST00000581677 2131 ntBASIC13.63□□□□□ -0.23
LHX2P50458 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LHX2P50458 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 FAM21FP-201ENST00000426241 1131 ntBASIC13.63□□□□□ -0.23
LHX2P50458 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.63□□□□□ -0.23
LHX2P50458 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.63□□□□□ -0.23
LHX2P50458 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.63□□□□□ -0.23
LHX2P50458 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LHX2P50458 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 AHCYP2-201ENST00000430630 1300 ntBASIC13.63□□□□□ -0.23
LHX2P50458 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LHX2P50458 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.63□□□□□ -0.23
LHX2P50458 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.63□□□□□ -0.23
LHX2P50458 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LHX2P50458 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LHX2P50458 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LHX2P50458 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.62□□□□□ -0.23
LHX2P50458 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LHX2P50458 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LHX2P50458 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms