Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AL137783.1-201ENST00000623494 1896 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC6A12P48065 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AL139094.1-201ENST00000405549 1188 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 HMGN1P19-201ENST00000436976 333 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 MYCLP2-201ENST00000449268 967 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 ELK1P1-201ENST00000485699 580 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC6A12P48065 AC018442.1-201ENST00000421439 2061 ntBASIC14.76□□□□□ -0.05
SLC6A12P48065 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SLC6A12P48065 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC6A12P48065 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC6A12P48065 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC232323.1-201ENST00000540724 2099 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A12P48065 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 LINC00552-201ENST00000625151 2579 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 SOCS2P1-201ENST00000417727 557 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A12P48065 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A12P48065 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A12P48065 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A12P48065 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC6A12P48065 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 AL513477.1-201ENST00000602865 2407 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SLC6A12P48065 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC6A12P48065 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC6A12P48065 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC6A12P48065 KRT8P14-201ENST00000414254 1442 ntBASIC14.75□□□□□ -0.05
SLC6A12P48065 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC6A12P48065 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC6A12P48065 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SLC6A12P48065 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A12P48065 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC6A12P48065 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms