Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.67□□□□□ -0.22
CD40LGP29965 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 FAAHP1-202ENST00000446499 1238 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.67□□□□□ -0.22
CD40LGP29965 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.67□□□□□ -0.22
CD40LGP29965 AC106795.1-205ENST00000512851 1056 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.67□□□□□ -0.22
CD40LGP29965 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 AC008608.2-201ENST00000606089 416 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 IFNL4P1-201ENST00000607083 540 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CD40LGP29965 AC114271.1-201ENST00000612689 2813 ntBASIC13.67□□□□□ -0.22
CD40LGP29965 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.67□□□□□ -0.22
CD40LGP29965 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CD40LGP29965 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CD40LGP29965 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 BEND3P3-201ENST00000611030 2440 ntBASIC13.66□□□□□ -0.22
CD40LGP29965 AC004241.5-201ENST00000623870 2448 ntBASIC13.66□□□□□ -0.22
CD40LGP29965 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 RPS2P28-201ENST00000314255 741 ntBASIC13.66□□□□□ -0.22
CD40LGP29965 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.66□□□□□ -0.22
CD40LGP29965 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 KRT126P-201ENST00000549467 1181 ntBASIC13.66□□□□□ -0.22
CD40LGP29965 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 REXO1L6P-202ENST00000619970 1078 ntBASIC13.66□□□□□ -0.22
CD40LGP29965 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.66□□□□□ -0.22
CD40LGP29965 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD40LGP29965 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CD40LGP29965 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD40LGP29965 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD40LGP29965 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD40LGP29965 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms