Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 AL591122.2-201ENST00000624125 1853 ntBASIC13.76□□□□□ -0.21
APOA1P02647 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 AC006504.4-201ENST00000592118 1568 ntBASIC13.76□□□□□ -0.21
APOA1P02647 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.76□□□□□ -0.21
APOA1P02647 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.76□□□□□ -0.21
APOA1P02647 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 ELK2BP-201ENST00000415014 1224 ntBASIC13.76□□□□□ -0.21
APOA1P02647 AL596275.1-201ENST00000423464 877 ntBASIC13.76□□□□□ -0.21
APOA1P02647 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.76□□□□□ -0.21
APOA1P02647 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
APOA1P02647 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.76□□□□□ -0.21
APOA1P02647 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.76□□□□□ -0.21
APOA1P02647 AC012615.1-201ENST00000565797 1299 ntBASIC13.76□□□□□ -0.21
APOA1P02647 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.76□□□□□ -0.21
APOA1P02647 AC099336.1-202ENST00000602961 463 ntBASIC13.76□□□□□ -0.21
APOA1P02647 AL031055.1-201ENST00000606362 631 ntBASIC13.76□□□□□ -0.21
APOA1P02647 AL121956.5-201ENST00000625261 221 ntBASIC13.76□□□□□ -0.21
APOA1P02647 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOA1P02647 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.76□□□□□ -0.21
APOA1P02647 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOA1P02647 AL023775.1-201ENST00000454907 1746 ntBASIC13.76□□□□□ -0.21
APOA1P02647 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.75□□□□□ -0.21
APOA1P02647 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.75□□□□□ -0.21
APOA1P02647 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOA1P02647 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.75□□□□□ -0.21
APOA1P02647 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 KRT16P4-201ENST00000453883 522 ntBASIC13.75□□□□□ -0.21
APOA1P02647 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.75□□□□□ -0.21
APOA1P02647 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.75□□□□□ -0.21
APOA1P02647 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.75□□□□□ -0.21
APOA1P02647 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.75□□□□□ -0.21
APOA1P02647 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
APOA1P02647 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOA1P02647 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.75□□□□□ -0.21
APOA1P02647 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms