Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 DGCR9-201ENST00000609630 2415 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
IFNA1P01562 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 PPT1-213ENST00000641319 2388 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 AC055811.4-201ENST00000624039 1754 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.2□□□□□ -0.46
IFNA1P01562 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
IFNA1P01562 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
IFNA1P01562 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
IFNA1P01562 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
IFNA1P01562 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
IFNA1P01562 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.19□□□□□ -0.46
IFNA1P01562 AK4P3-201ENST00000418260 669 ntBASIC12.19□□□□□ -0.46
IFNA1P01562 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.19□□□□□ -0.46
IFNA1P01562 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.19□□□□□ -0.46
IFNA1P01562 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.19□□□□□ -0.46
IFNA1P01562 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.19□□□□□ -0.46
IFNA1P01562 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.19□□□□□ -0.46
IFNA1P01562 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 AC002347.1-201ENST00000569543 541 ntBASIC12.19□□□□□ -0.46
IFNA1P01562 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.19□□□□□ -0.46
IFNA1P01562 AL450472.2-201ENST00000603663 1156 ntBASIC12.19□□□□□ -0.46
IFNA1P01562 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 AC027612.1-201ENST00000445234 2395 ntBASIC12.19□□□□□ -0.46
IFNA1P01562 AL356585.2-201ENST00000625078 2396 ntBASIC12.19□□□□□ -0.46
IFNA1P01562 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.19□□□□□ -0.46
IFNA1P01562 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
IFNA1P01562 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
IFNA1P01562 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 AP001267.2-201ENST00000532619 2086 ntBASIC12.18□□□□□ -0.46
IFNA1P01562 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.18□□□□□ -0.46
IFNA1P01562 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
IFNA1P01562 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.18□□□□□ -0.46
IFNA1P01562 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms