Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.21■□□□□ 0.35
ACTN4O43707 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
ACTN4O43707 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.21■□□□□ 0.35
ACTN4O43707 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.21■□□□□ 0.35
ACTN4O43707 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.21■□□□□ 0.35
ACTN4O43707 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.21■□□□□ 0.35
ACTN4O43707 AC135586.1-201ENST00000539323 574 ntBASIC17.21■□□□□ 0.35
ACTN4O43707 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.21■□□□□ 0.35
ACTN4O43707 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.21■□□□□ 0.35
ACTN4O43707 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.21■□□□□ 0.35
ACTN4O43707 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.21■□□□□ 0.35
ACTN4O43707 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
ACTN4O43707 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.21■□□□□ 0.34
ACTN4O43707 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
ACTN4O43707 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ACTN4O43707 AC018442.1-201ENST00000421439 2061 ntBASIC17.2■□□□□ 0.34
ACTN4O43707 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 AC022144.1-201ENST00000602255 1580 ntBASIC17.2■□□□□ 0.34
ACTN4O43707 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 MRPS18AP1-201ENST00000414458 589 ntBASIC17.2■□□□□ 0.34
ACTN4O43707 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.2■□□□□ 0.34
ACTN4O43707 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.2■□□□□ 0.34
ACTN4O43707 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.2■□□□□ 0.34
ACTN4O43707 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ACTN4O43707 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.2■□□□□ 0.34
ACTN4O43707 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.2■□□□□ 0.34
ACTN4O43707 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.2■□□□□ 0.34
ACTN4O43707 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ACTN4O43707 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ACTN4O43707 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.19■□□□□ 0.34
ACTN4O43707 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.19■□□□□ 0.34
ACTN4O43707 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ACTN4O43707 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms