Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ALG1L8P-201ENST00000533887 760 ntBASIC15.98■□□□□ 0.15
CCDC188H7C350 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCDC188H7C350 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.98■□□□□ 0.15
CCDC188H7C350 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CCDC188H7C350 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC188H7C350 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CCDC188H7C350 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC188H7C350 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 Z97205.2-201ENST00000564697 1639 ntBASIC15.97■□□□□ 0.15
CCDC188H7C350 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCDC188H7C350 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC188H7C350 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC188H7C350 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC188H7C350 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC188H7C350 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC188H7C350 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC188H7C350 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCDC188H7C350 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC188H7C350 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC188H7C350 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC188H7C350 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC188H7C350 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 YBX2P1-201ENST00000394192 760 ntBASIC15.96■□□□□ 0.15
CCDC188H7C350 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.96■□□□□ 0.15
CCDC188H7C350 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC188H7C350 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC188H7C350 RN7SL828P-201ENST00000607615 303 ntBASIC15.96■□□□□ 0.15
CCDC188H7C350 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CCDC188H7C350 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 AL035456.1-201ENST00000456064 1369 ntBASIC15.96■□□□□ 0.15
CCDC188H7C350 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC188H7C350 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC188H7C350 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC188H7C350 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC188H7C350 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
CCDC188H7C350 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC188H7C350 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms