Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AL162726.2-201ENST00000438986 1017 ntBASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 CU634019.7-201ENST00000624153 1185 ntBASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC005252.2-201ENST00000624630 1141 ntBASIC14.57□□□□□ -0.08
LRIT2A6NDA9 FP236241.2-201ENST00000624906 1185 ntBASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
LRIT2A6NDA9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRIT2A6NDA9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 ACKR1-201ENST00000368121 1240 ntBASIC14.56□□□□□ -0.08
LRIT2A6NDA9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 HLA-K-203ENST00000430151 1046 ntBASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AC114812.1-204ENST00000449669 728 ntBASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.56□□□□□ -0.08
LRIT2A6NDA9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms