Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC005252.3-201ENST00000623855 2258 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC074338.1-201ENST00000416825 156 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC015922.1-201ENST00000421102 1152 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AL109936.8-201ENST00000641772 604 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 ST20-AS1-201ENST00000560255 4223 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AC106881.1-201ENST00000605849 3329 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 CICP14-201ENST00000629111 2732 ntBASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HLA-DRB4X5D2U9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 BTBD7P1-201ENST00000447253 1453 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 BASP1P1-201ENST00000430708 665 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RPL13P2-201ENST00000440687 659 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms