Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LETMD1Q6P1Q0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 METTL21AP1-201ENST00000438852 635 ntBASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.85□□□□□ -0.03
LETMD1Q6P1Q0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 CLK3P2-201ENST00000427566 1453 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AC008738.7-201ENST00000609744 511 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AL390754.1-201ENST00000619088 582 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AC007787.1-201ENST00000588095 1583 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 KRT18P28-201ENST00000453838 1332 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms