Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC009145.4-201ENST00000625119 1294 ntBASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 POU5F1P2-201ENST00000521750 823 ntBASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 AC084781.1-201ENST00000613737 656 ntBASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPAQ5VT25 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 AP002803.1-201ENST00000528836 498 ntBASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 MBP-201ENST00000354542 575 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 AC114501.1-201ENST00000445949 172 ntBASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 TPM1-223ENST00000560445 485 ntTSL 3 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.54■■□□□ 1.2
CDC42BPAQ5VT25 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 KRT18P66-201ENST00000452970 1269 ntBASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 PFN2-206ENST00000461930 606 ntTSL 4 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 RN7SL81P-201ENST00000493781 261 ntBASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CDC42BPAQ5VT25 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms