Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 GPR53P-205ENST00000457298 1084 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 AC106760.1-201ENST00000508690 800 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 BCRP6-201ENST00000510112 632 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 BCRP7-201ENST00000511549 544 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 AP001063.1-201ENST00000568332 529 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 AC106886.1-201ENST00000568660 600 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.28■□□□□ 0.2
CACNA2D1P54289 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 AC119751.2-201ENST00000504529 210 ntBASIC16.28■□□□□ 0.2
CACNA2D1P54289 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 IGHV3-71-201ENST00000523324 359 ntBASIC16.28■□□□□ 0.2
CACNA2D1P54289 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 RAB43P1-201ENST00000561790 589 ntBASIC16.28■□□□□ 0.2
CACNA2D1P54289 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.28■□□□□ 0.2
CACNA2D1P54289 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.28■□□□□ 0.2
CACNA2D1P54289 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CACNA2D1P54289 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC104581.4-201ENST00000623126 3052 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CACNA2D1P54289 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 MIR1909-201ENST00000411312 80 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 BAATP1-201ENST00000412284 1225 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 AC012441.1-201ENST00000446669 685 ntBASIC16.27■□□□□ 0.2
CACNA2D1P54289 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CACNA2D1P54289 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms