Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 AC007292.2-201ENST00000593524 1812 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 KRT8P44-201ENST00000441609 1350 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RNF144AP50876 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF144AP50876 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 GNAQP1-201ENST00000444815 1067 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 AC009477.1-201ENST00000452936 217 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 AC004890.2-204ENST00000481968 304 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 SDHAP3-202ENST00000515467 728 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF144AP50876 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 CICP24-201ENST00000605464 2705 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 AC015656.1-201ENST00000624209 3578 ntBASIC14.36□□□□□ -0.11
RNF144AP50876 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF144AP50876 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF144AP50876 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RNF144AP50876 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF144AP50876 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF144AP50876 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 MRPS18AP1-201ENST00000414458 589 ntBASIC14.35□□□□□ -0.11
RNF144AP50876 AC015922.1-201ENST00000421102 1152 ntBASIC14.35□□□□□ -0.11
RNF144AP50876 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.35□□□□□ -0.11
RNF144AP50876 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF144AP50876 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 AL121723.1-201ENST00000445194 1519 ntBASIC14.35□□□□□ -0.11
RNF144AP50876 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF144AP50876 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RNF144AP50876 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF144AP50876 AC022144.1-201ENST00000602255 1580 ntBASIC14.34□□□□□ -0.11
RNF144AP50876 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms