Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.23■□□□□ 0.19
CHKAP35790 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.23■□□□□ 0.19
CHKAP35790 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.23■□□□□ 0.19
CHKAP35790 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.23■□□□□ 0.19
CHKAP35790 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CHKAP35790 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHKAP35790 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CHKAP35790 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.22■□□□□ 0.19
CHKAP35790 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.22■□□□□ 0.19
CHKAP35790 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.22■□□□□ 0.19
CHKAP35790 AC244107.1-201ENST00000442033 332 ntBASIC16.22■□□□□ 0.19
CHKAP35790 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.22■□□□□ 0.19
CHKAP35790 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 RN7SL837P-201ENST00000463010 287 ntBASIC16.22■□□□□ 0.19
CHKAP35790 KRT18P43-201ENST00000469825 1281 ntBASIC16.22■□□□□ 0.19
CHKAP35790 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.22■□□□□ 0.19
CHKAP35790 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 AC132938.2-201ENST00000579188 680 ntBASIC16.22■□□□□ 0.19
CHKAP35790 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.22■□□□□ 0.19
CHKAP35790 AC133539.2-201ENST00000604757 467 ntBASIC16.22■□□□□ 0.19
CHKAP35790 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.22■□□□□ 0.19
CHKAP35790 IGHV3-72-202ENST00000621503 303 ntBASIC16.22■□□□□ 0.19
CHKAP35790 AL591163.1-201ENST00000641757 987 ntBASIC16.22■□□□□ 0.19
CHKAP35790 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.22■□□□□ 0.19
CHKAP35790 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.22■□□□□ 0.19
CHKAP35790 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHKAP35790 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.21■□□□□ 0.19
CHKAP35790 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHKAP35790 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHKAP35790 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHKAP35790 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHKAP35790 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHKAP35790 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
CHKAP35790 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.21■□□□□ 0.19
CHKAP35790 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms