Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
VCANP13611 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC15.47■□□□□ 0.07
VCANP13611 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 AC006986.1-201ENST00000612764 241 ntBASIC15.47■□□□□ 0.07
VCANP13611 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.47■□□□□ 0.07
VCANP13611 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.47■□□□□ 0.07
VCANP13611 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.47■□□□□ 0.07
VCANP13611 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCANP13611 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
VCANP13611 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.46■□□□□ 0.07
VCANP13611 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.46■□□□□ 0.07
VCANP13611 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VCANP13611 AC011270.2-201ENST00000624293 2550 ntBASIC15.46■□□□□ 0.07
VCANP13611 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
VCANP13611 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 AL121949.3-201ENST00000406684 385 ntBASIC15.46■□□□□ 0.07
VCANP13611 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 RPL35P9-201ENST00000446059 350 ntBASIC15.46■□□□□ 0.07
VCANP13611 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.46■□□□□ 0.07
VCANP13611 AC004466.1-201ENST00000599515 1080 ntBASIC15.46■□□□□ 0.07
VCANP13611 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.46■□□□□ 0.07
VCANP13611 AC138466.3-201ENST00000619983 221 ntBASIC15.46■□□□□ 0.07
VCANP13611 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VCANP13611 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.46■□□□□ 0.07
VCANP13611 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VCANP13611 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.46■□□□□ 0.06
VCANP13611 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.46■□□□□ 0.06
VCANP13611 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VCANP13611 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 TMA16-204ENST00000508268 608 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 LINC00554-201ENST00000564841 3011 ntBASIC15.45■□□□□ 0.06
VCANP13611 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.45■□□□□ 0.06
VCANP13611 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 RHOQP2-201ENST00000449922 579 ntBASIC15.45■□□□□ 0.06
VCANP13611 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VCANP13611 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.45■□□□□ 0.06
VCANP13611 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.45■□□□□ 0.06
VCANP13611 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.45■□□□□ 0.06
VCANP13611 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCANP13611 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.45■□□□□ 0.06
VCANP13611 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
VCANP13611 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.45■□□□□ 0.06
VCANP13611 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms