Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE3O75131 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CPNE3O75131 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.84□□□□□ -0.03
CPNE3O75131 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 RPS2P32-201ENST00000439199 892 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE3O75131 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE3O75131 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 SLC25A47P1-201ENST00000531577 414 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE3O75131 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.84□□□□□ -0.03
CPNE3O75131 AC009486.1-201ENST00000569860 813 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.84□□□□□ -0.03
CPNE3O75131 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.84□□□□□ -0.03
CPNE3O75131 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPNE3O75131 AL161772.1-201ENST00000610494 4412 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 AC138035.3-201ENST00000622706 2791 ntBASIC14.84□□□□□ -0.03
CPNE3O75131 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CPNE3O75131 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.83□□□□□ -0.03
CPNE3O75131 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
CPNE3O75131 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE3O75131 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.83□□□□□ -0.03
CPNE3O75131 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE3O75131 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE3O75131 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.83□□□□□ -0.03
CPNE3O75131 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPNE3O75131 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 AL133267.1-201ENST00000398220 340 ntBASIC14.83□□□□□ -0.04
CPNE3O75131 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE3O75131 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.83□□□□□ -0.04
CPNE3O75131 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE3O75131 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CPNE3O75131 KRT223P-202ENST00000449164 1292 ntBASIC14.83□□□□□ -0.04
CPNE3O75131 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE3O75131 AC068587.3-201ENST00000526613 355 ntBASIC14.83□□□□□ -0.04
CPNE3O75131 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CPNE3O75131 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.83□□□□□ -0.04
CPNE3O75131 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.83□□□□□ -0.04
CPNE3O75131 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.83□□□□□ -0.04
CPNE3O75131 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.83□□□□□ -0.04
CPNE3O75131 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CPNE3O75131 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.83□□□□□ -0.04
CPNE3O75131 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms