Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPK2O43353 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RIPK2O43353 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RIPK2O43353 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 TPT1P11-201ENST00000458482 498 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 AC069335.1-201ENST00000489972 472 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 SLED1-202ENST00000512051 380 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 RNA5SP416-201ENST00000516838 111 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.62■□□□□ 0.09
RIPK2O43353 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.62■□□□□ 0.09
RIPK2O43353 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RIPK2O43353 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.62■□□□□ 0.09
RIPK2O43353 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 AC025181.2-201ENST00000606994 802 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 AC055811.4-201ENST00000624039 1754 ntBASIC15.62■□□□□ 0.09
RIPK2O43353 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RIPK2O43353 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RIPK2O43353 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.62■□□□□ 0.09
RIPK2O43353 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RIPK2O43353 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.61■□□□□ 0.09
RIPK2O43353 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RIPK2O43353 AL133267.1-201ENST00000398220 340 ntBASIC15.61■□□□□ 0.09
RIPK2O43353 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 AL353705.2-201ENST00000428243 662 ntBASIC15.61■□□□□ 0.09
RIPK2O43353 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.61■□□□□ 0.09
RIPK2O43353 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.61■□□□□ 0.09
RIPK2O43353 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.61■□□□□ 0.09
RIPK2O43353 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RIPK2O43353 LILRP1-201ENST00000444199 1370 ntBASIC15.61■□□□□ 0.09
RIPK2O43353 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RIPK2O43353 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RIPK2O43353 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms