Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.36■□□□□ 0.69
NPHP1O15259 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NPHP1O15259 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.35■□□□□ 0.69
NPHP1O15259 RN7SL48P-201ENST00000579283 293 ntBASIC19.35■□□□□ 0.69
NPHP1O15259 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.35■□□□□ 0.69
NPHP1O15259 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.35■□□□□ 0.69
NPHP1O15259 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NPHP1O15259 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.35■□□□□ 0.69
NPHP1O15259 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPHP1O15259 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NPHP1O15259 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 CNN2P10-201ENST00000443067 918 ntBASIC19.34■□□□□ 0.69
NPHP1O15259 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.34■□□□□ 0.69
NPHP1O15259 HIST2H2BC-201ENST00000498492 580 ntBASIC19.34■□□□□ 0.69
NPHP1O15259 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.34■□□□□ 0.69
NPHP1O15259 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.34■□□□□ 0.69
NPHP1O15259 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NPHP1O15259 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 PCDHA1-201ENST00000378133 2726 ntBASIC19.34■□□□□ 0.69
NPHP1O15259 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPHP1O15259 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.34■□□□□ 0.69
NPHP1O15259 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
NPHP1O15259 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPHP1O15259 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPHP1O15259 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
NPHP1O15259 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPHP1O15259 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
NPHP1O15259 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
NPHP1O15259 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC19.33■□□□□ 0.69
NPHP1O15259 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPHP1O15259 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
NPHP1O15259 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPHP1O15259 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
NPHP1O15259 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.33■□□□□ 0.69
NPHP1O15259 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NPHP1O15259 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPHP1O15259 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.33■□□□□ 0.68
NPHP1O15259 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.33■□□□□ 0.68
NPHP1O15259 UPF3AP2-201ENST00000457924 1132 ntBASIC19.33■□□□□ 0.68
NPHP1O15259 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.33■□□□□ 0.68
NPHP1O15259 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.33■□□□□ 0.68
NPHP1O15259 MIR4313-201ENST00000580760 101 ntBASIC19.33■□□□□ 0.68
NPHP1O15259 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.33■□□□□ 0.68
NPHP1O15259 AC025181.2-201ENST00000606994 802 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms