Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 RARRES2P5-201ENST00000564013 466 ntBASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM6-TRIM34B2RNG4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM6-TRIM34B2RNG4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 GHSR-202ENST00000427970 912 ntBASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC036164.1-201ENST00000570544 333 ntBASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AP000845.1-201ENST00000581677 2131 ntBASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM6-TRIM34B2RNG4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 WASH3P-207ENST00000560956 1394 ntBASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 FAM86LP-201ENST00000478302 853 ntBASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM6-TRIM34B2RNG4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms