Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 PIN1P1-201ENST00000412108 996 ntBASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 AC009118.2-201ENST00000613275 655 ntBASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FGD5P1-202ENST00000614866 2498 ntBASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX49Q9Y6V7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AL035456.1-201ENST00000456064 1369 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AC063926.2-201ENST00000623766 1308 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RN7SL692P-201ENST00000464677 288 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DDX49Q9Y6V7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 SBF1P1-201ENST00000444527 5631 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 AC044860.1-202ENST00000559481 777 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 AC104794.3-201ENST00000566840 1248 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX49Q9Y6V7 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms