Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC026120.1-201ENST00000611536 926 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AC092865.6-201ENST00000642101 219 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 HLA-A-201ENST00000376802 1334 ntBASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D4Q9Y2X8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 BEND3P1-201ENST00000421591 1944 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC018442.1-201ENST00000421439 2061 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC079140.1-201ENST00000508039 487 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 RNA5SP416-201ENST00000516838 111 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 LINC01225-203ENST00000563550 1244 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 RARRES2P9-201ENST00000565168 469 ntBASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
UBE2D4Q9Y2X8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms