Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 AC005225.4-201ENST00000557330 545 ntBASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AL596325.1-201ENST00000563991 1082 ntBASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AC012645.4-201ENST00000610691 1061 ntBASIC16.84■□□□□ 0.29
L1RE1Q9UN81 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 CLK3P2-201ENST00000427566 1453 ntBASIC16.84■□□□□ 0.29
L1RE1Q9UN81 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 AL137784.3-201ENST00000623858 2288 ntBASIC16.84■□□□□ 0.29
L1RE1Q9UN81 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
L1RE1Q9UN81 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
L1RE1Q9UN81 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
L1RE1Q9UN81 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 MROH4P-201ENST00000431302 1578 ntBASIC16.83■□□□□ 0.28
L1RE1Q9UN81 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 RN7SL692P-201ENST00000464677 288 ntBASIC16.83■□□□□ 0.28
L1RE1Q9UN81 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 RRP7BP-205ENST00000566851 833 ntBASIC16.83■□□□□ 0.28
L1RE1Q9UN81 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 AC093726.1-201ENST00000608064 963 ntBASIC16.83■□□□□ 0.28
L1RE1Q9UN81 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 MIR8072-201ENST00000614241 80 ntBASIC16.83■□□□□ 0.28
L1RE1Q9UN81 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
L1RE1Q9UN81 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 KRT8P44-201ENST00000441609 1350 ntBASIC16.82■□□□□ 0.28
L1RE1Q9UN81 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 MYCLP2-201ENST00000449268 967 ntBASIC16.82■□□□□ 0.28
L1RE1Q9UN81 ELK1P1-201ENST00000485699 580 ntBASIC16.82■□□□□ 0.28
L1RE1Q9UN81 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
L1RE1Q9UN81 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms