Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 GPR182-203ENST00000622922 591 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TUBB1P2-201ENST00000422712 1306 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TUBB1P1-201ENST00000503144 1300 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HDAC6Q9UBN7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 DRD5P1-201ENST00000456605 1438 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AC016694.1-201ENST00000434179 700 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AL355994.2-201ENST00000447882 704 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AC026410.3-201ENST00000514280 936 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 MIR6869-201ENST00000619434 62 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 CICP13-201ENST00000422015 2789 ntBASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HDAC6Q9UBN7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HDAC6Q9UBN7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.39■□□□□ 0.38
HDAC6Q9UBN7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
HDAC6Q9UBN7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 FAM21FP-201ENST00000426241 1131 ntBASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDAC6Q9UBN7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms