Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 CYP4F24P-201ENST00000586049 1580 ntBASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 CICP17-201ENST00000418553 2377 ntBASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 CICP23-201ENST00000605013 2741 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 FAM58CP-201ENST00000435741 640 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 EEF1DP4-201ENST00000446006 880 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 AP000842.3-202ENST00000569238 1080 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 FOXO1B-201ENST00000504678 1527 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 C18orf15-201ENST00000623680 2534 ntBASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PCDHB16Q9NRJ7 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC112693.3-201ENST00000624819 1983 ntBASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 BEND3P1-201ENST00000421591 1944 ntBASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MCCD1P2-201ENST00000423228 335 ntBASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms