Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 CICP11-201ENST00000434745 2827 ntBASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 CETN4P-206ENST00000642099 2168 ntBASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.28□□□□□ -0.12
POLR2J3Q9H1A7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
POLR2J3Q9H1A7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 MTND6P24-201ENST00000440466 518 ntBASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 AC140479.7-201ENST00000636301 2332 ntBASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
POLR2J3Q9H1A7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 ACE3P-201ENST00000423435 1973 ntBASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
POLR2J3Q9H1A7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms