Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 ST20-AS1-201ENST00000560255 4223 ntBASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 RN7SL589P-201ENST00000481268 310 ntBASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 KRT8P48-201ENST00000515599 1220 ntBASIC15.01□□□□□ -0.01
EBF4Q9BQW3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.01□□□□□ -0.01
EBF4Q9BQW3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
EBF4Q9BQW3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15□□□□□ -0.01
EBF4Q9BQW3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15□□□□□ -0.01
EBF4Q9BQW3 HLA-A-201ENST00000376802 1334 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15□□□□□ -0.01
EBF4Q9BQW3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 FAAHP1-202ENST00000446499 1238 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15□□□□□ -0.01
EBF4Q9BQW3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15□□□□□ -0.01
EBF4Q9BQW3 BANF1P1-201ENST00000553684 263 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 AC092902.6-201ENST00000641783 218 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15□□□□□ -0.01
EBF4Q9BQW3 AC011474.4-201ENST00000623523 2076 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 OR2I1P-209ENST00000641730 5365 ntBASIC15□□□□□ -0.01
EBF4Q9BQW3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
EBF4Q9BQW3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
EBF4Q9BQW3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15□□□□□ -0.01
EBF4Q9BQW3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15□□□□□ -0.01
EBF4Q9BQW3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15□□□□□ -0.01
EBF4Q9BQW3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EBF4Q9BQW3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms