Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AC104457.1-201ENST00000401024 814 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 DOC2GP-202ENST00000514950 1163 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 TPRX2P-201ENST00000535362 881 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 LINC01101-201ENST00000622953 1884 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 CICP24-201ENST00000605464 2705 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.41□□□□□ -0.1
NUP43Q8NFH3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.41□□□□□ -0.1
NUP43Q8NFH3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 CYMP-203ENST00000474680 1263 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 RNA5SP421-201ENST00000516864 134 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 RARRES2P5-201ENST00000564013 466 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AC036164.1-201ENST00000570544 333 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 OR2I1P-210ENST00000642037 4691 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AC013726.1-201ENST00000563747 2285 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 ACE3P-201ENST00000423435 1973 ntBASIC14.4□□□□□ -0.1
NUP43Q8NFH3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms