Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 RN7SL48P-201ENST00000579283 293 ntBASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 AL096828.3-201ENST00000615354 462 ntBASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 AC148477.4-201ENST00000613430 1793 ntBASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
COLGALT1Q8NBJ5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 NUS1P3-201ENST00000423502 862 ntBASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 CNN2P10-201ENST00000443067 918 ntBASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AC004898.1-201ENST00000451057 766 ntBASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AKR7A2P1-201ENST00000460134 915 ntBASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 AL021578.1-201ENST00000613646 709 ntBASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
COLGALT1Q8NBJ5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
COLGALT1Q8NBJ5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AC091804.1-201ENST00000486888 567 ntBASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 SCARNA20.5-201ENST00000516991 142 ntBASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 ACTG1P17-201ENST00000558391 1119 ntBASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.51■□□□□ 0.23
COLGALT1Q8NBJ5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COLGALT1Q8NBJ5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms