Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCNYL1Q8N7R7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 SPDYE17-201ENST00000412399 783 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 FAM8A3P-201ENST00000427218 844 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RBPMS2P1-201ENST00000437762 623 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RN7SL828P-201ENST00000607615 303 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AL359258.3-201ENST00000622910 2331 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 AC140479.7-201ENST00000636301 2332 ntBASIC15.25■□□□□ 0.03
CCNYL1Q8N7R7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCNYL1Q8N7R7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms