Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM4P67936 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM4P67936 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM4P67936 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TPM4P67936 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TPM4P67936 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM4P67936 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TPM4P67936 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM4P67936 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TPM4P67936 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 KRT18P2-201ENST00000447938 1258 ntBASIC17.3■□□□□ 0.36
TPM4P67936 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 AP000842.3-202ENST00000569238 1080 ntBASIC17.3■□□□□ 0.36
TPM4P67936 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.3■□□□□ 0.36
TPM4P67936 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPM4P67936 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM4P67936 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TPM4P67936 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPM4P67936 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TPM4P67936 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM4P67936 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM4P67936 AC145285.3-201ENST00000564603 959 ntBASIC17.29■□□□□ 0.36
TPM4P67936 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM4P67936 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TPM4P67936 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM4P67936 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TPM4P67936 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM4P67936 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TPM4P67936 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.28■□□□□ 0.36
TPM4P67936 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms